Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Coprobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Barnesiellaceae |
| Genus | Coprobacter |
| Species | Coprobacter fastidiosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1
Accession NumberRBXN00000000.1
Gene Summary
Adenine Count
1062793 bp
Thymine Count
1041029 bp
Guanine Count
642659 bp
Cytosine Count
665339 bp
Genome Length
3411820 bp
Protein-coding Genes
2670 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | BC742_0493 | Not Available | - | 604489 - 605628 | 43768.6 |
| dtdp-4-dehydrorhamnose reductase | BC742_0494 | Not Available | - | 605635 - 606495 | 32229.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BC742_0495 | Not Available | - | 606495 - 607064 | 21804.8 |
| glucose-1-phosphate thymidylyltransferase | BC742_0496 | Not Available | - | 607064 - 607951 | 32839.6 |
| capsular exopolysaccharide synthesis family protein | BC742_0497 | Not Available | - | 607988 - 610396 | 89527.8 |
| polysaccharide export outer membrane protein | BC742_0498 | Not Available | - | 610420 - 611217 | 29402.7 |
| transcription termination factor nusg | BC742_0499 | Not Available | - | 611262 - 611822 | 21217.0 |
| site-specific recombinase xerd | BC742_0500 | Not Available | - | 612670 - 613902 | 48003.1 |
| dna polymerase-4 | BC742_0502 | Not Available | + | 615168 - 616202 | 38734.2 |
| tfp pilus assembly protein pilf | BC742_0503 | Not Available | + | 616403 - 618628 | 87288.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.