Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Coprobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Barnesiellaceae |
| Genus | Coprobacter |
| Species | Coprobacter fastidiosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1
Accession NumberRBXN00000000.1
Gene Summary
Adenine Count
1062793 bp
Thymine Count
1041029 bp
Guanine Count
642659 bp
Cytosine Count
665339 bp
Genome Length
3411820 bp
Protein-coding Genes
2670 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit | BC742_2475 | Not Available | - | 3048281 - 3049684 | 51026.2 |
| 2-isopropylmalate synthase | BC742_2476 | Not Available | - | 3049703 - 3051199 | 54352.0 |
| hypothetical protein | BC742_2477 | Not Available | - | 3051546 - 3052145 | 22525.1 |
| rna polymerase primary sigma factor | BC742_2478 | Not Available | - | 3052236 - 3053096 | 32638.2 |
| do/deqq family serine protease | BC742_2479 | Not Available | - | 3053348 - 3054850 | 53529.1 |
| membrane protein | BC742_2481 | Not Available | + | 3055532 - 3056911 | 52313.3 |
| heparinase ii/iii-like protein | BC742_2482 | Not Available | + | 3056996 - 3058912 | 73612.0 |
| glycosyltransferase involved in cell wall biosynthesis | BC742_2483 | Not Available | + | 3059092 - 3060039 | 35977.1 |
| trka family protein | BC742_2484 | Not Available | - | 3060371 - 3062233 | 67647.5 |
| sp family xylose:h+ symportor-like mfs transporter | BC742_2485 | Not Available | - | 3062432 - 3063880 | 52951.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.