Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Coprobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Barnesiellaceae |
| Genus | Coprobacter |
| Species | Coprobacter fastidiosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1
Accession NumberRBXN00000000.1
Gene Summary
Adenine Count
1062793 bp
Thymine Count
1041029 bp
Guanine Count
642659 bp
Cytosine Count
665339 bp
Genome Length
3411820 bp
Protein-coding Genes
2670 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-galactosidase | BC742_1990 | Not Available | - | 2457452 - 2459566 | 78610.7 |
| peroxiredoxin | BC742_1991 | Not Available | - | 2459601 - 2460290 | 26550.2 |
| alginate lyase | BC742_1992 | Not Available | - | 2460647 - 2462641 | 76412.6 |
| hypothetical protein | BC742_1993 | Not Available | - | 2463070 - 2463228 | 6320.93 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | BC742_1994 | Not Available | + | 2463361 - 2464320 | 36167.6 |
| dna polymerase-3 subunit delta' | BC742_1995 | Not Available | + | 2464345 - 2465469 | 43638.8 |
| Tmrna,resume consensus sequence (at 89): tttaactggcgaaaataa | Not Available | Not Available | + | 2465558 - 2465953 | Not Available |
| rna polymerase sigma factor (sigma-70 family) | BC742_1997 | Not Available | - | 2466146 - 2466625 | 19153.3 |
| putative abc transport system permease protein | BC742_1998 | Not Available | - | 2467054 - 2467830 | 28790.3 |
| amino acid abc transporter atp-binding protein (paat family) | BC742_1999 | Not Available | - | 2467827 - 2468453 | 23232.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.