Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Coprobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Barnesiellaceae |
| Genus | Coprobacter |
| Species | Coprobacter fastidiosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1
Accession NumberRBXN00000000.1
Gene Summary
Adenine Count
1062793 bp
Thymine Count
1041029 bp
Guanine Count
642659 bp
Cytosine Count
665339 bp
Genome Length
3411820 bp
Protein-coding Genes
2670 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-triphosphate reductase class iii catalytic subunit | BC742_1177 | Not Available | - | 1451007 - 1453214 | 83428.3 |
| l-aspartate oxidase | BC742_1178 | Not Available | - | 1453533 - 1455107 | 58677.3 |
| hypothetical protein | BC742_1179 | Not Available | - | 1455097 - 1455276 | 7174.89 |
| ph (pleckstrin homology) domain-containing protein | BC742_1180 | Not Available | + | 1455392 - 1455640 | 9479.63 |
| beta-glucosidase | BC742_1181 | Not Available | - | 1455718 - 1458324 | 97073.3 |
| nucleoside-diphosphate-sugar epimerase | BC742_1182 | Not Available | - | 1458366 - 1459376 | 38742.9 |
| tetratricopeptide repeat protein | BC742_1183 | Not Available | + | 1459574 - 1462831 | 124364.0 |
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | BC742_1184 | Not Available | + | 1462907 - 1463530 | 24571.8 |
| epoxyqueuosine reductase | BC742_1185 | Not Available | + | 1463511 - 1464452 | 36309.6 |
| quinolinate synthetase | BC742_1186 | Not Available | - | 1464441 - 1465430 | 36359.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.