Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas edaphi |
| Strain | strain DAC4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
449324 bp
Thymine Count
448770 bp
Guanine Count
736304 bp
Cytosine Count
738754 bp
Genome Length
2373152 bp
Protein-coding Genes
2311 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| calcium-binding protein | D3M59_00005 | Not Available | + | 1 - 2721 | 89797.0 |
| llm class flavin-dependent oxidoreductase | D3M59_00010 | Not Available | - | 2735 - 3742 | 35926.9 |
| duf1294 domain-containing protein | D3M59_00015 | Not Available | - | 3885 - 4160 | 10272.9 |
| diguanylate cyclase | D3M59_00020 | Not Available | + | 4359 - 6017 | 57697.0 |
| mfs transporter | D3M59_00025 | Not Available | - | 6148 - 7392 | 43604.6 |
| arsr family transcriptional regulator | D3M59_00030 | Not Available | + | 7485 - 7814 | 11921.3 |
| mbl fold metallo-hydrolase | D3M59_00035 | Not Available | + | 7821 - 8747 | 34085.6 |
| yeee/yede family protein | D3M59_00040 | Not Available | + | 8747 - 9187 | 14621.3 |
| yeee/yede family protein | D3M59_00045 | Not Available | + | 9184 - 9636 | 15837.0 |
| tigr01244 family phosphatase | D3M59_00050 | Not Available | + | 9516 - 10058 | 19262.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.