Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HR135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain HR135
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-associated protein rapa | D3O91_02595 | Not Available | Negative | 521436 - 524342 | 109688.0 |
| dna polymerase ii | D3O91_02600 | Not Available | Negative | 524507 - 526858 | 90035.6 |
| l-ribulose-5-phosphate 4-epimerase | D3O91_02605 | Not Available | Negative | 526933 - 527628 | 25474.3 |
| l-arabinose isomerase | D3O91_02610 | Not Available | Negative | 527828 - 529330 | 56136.2 |
| ribulokinase | D3O91_02615 | Not Available | Negative | 529341 - 531041 | 60954.5 |
| arabinose operon regulatory protein | D3O91_02625 | Not Available | Positive | 531380 - 532258 | 33385.8 |
| deda family protein | D3O91_02630 | Not Available | Positive | 532344 - 533108 | 28229.8 |
| thiamine abc transporter atp-binding protein thiq | D3O91_02635 | Not Available | Negative | 533222 - 533920 | 25011.6 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | D3O91_02640 | Not Available | Negative | 533904 - 535514 | 59419.7 |
| thiamine-binding periplasmic protein | D3O91_02645 | Not Available | Negative | 535490 - 536473 | 36209.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





