Nakamurella silvestris strain DSM 102309

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Nakamurellales

Family

Nakamurellaceae

Genus

Nakamurella

Description

Nakamurella silvestris strain DSM 102309 is a Gram-positive, rod-shaped bacterium characterized by its non-spore-forming nature and its capacity as an organotrophic chemotroph. The optimal growth temperature for this strain is 25.0°C, indicating a preference for mesophilic conditions. As an organotroph, N. silvestris utilizes organic compounds as its primary energy source, which suggests its potential involvement in the decomposition of organic matter in its native habitat. The classification of N. silvestris within the broader context of microbial ecology highlights its role in nutrient cycling, particularly in environments where organic substrates are abundant. By utilizing organic materials for energy, this strain may contribute to the microbial community's overall metabolic diversity and functionality. Furthermore, the non-spore-forming characteristic of N. silvestris implies that it may rely on environmental stability for survival, potentially influencing its ecological niche and interactions with other microorganisms. As such, this bacterium could play a significant role in the dynamics of microbial communities, particularly in the decomposition processes within soil or similar environments where organic matter is prevalent.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderNakamurellales
FamilyNakamurellaceae
GenusNakamurella
SpeciesNakamurella silvestris
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Nakamurella silvestris strain DSM 102309

Accession NumberQXCQ00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
thymidylate synthaseD1871_00500Not Available+132579 - 13337329672.6
dihydrofolate reductaseD1871_00505Not Available+133370 - 13390019550.2
act domain-containing proteinD1871_00510Not Available+133887 - 13429114651.6
xre family transcriptional regulatorD1871_00515Not Available-134400 - 13475312342.6
cina family proteinD1871_00520Not Available-134881 - 13542618381.3
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseD1871_00525Not Available-135426 - 13601621635.2
30s ribosomal protein s12 methylthiotransferase rimoD1871_00530Not Available-136013 - 13750952163.5
amino-acid n-acetyltransferaseD1871_00535Not Available+137651 - 13822621003.1
preprotein translocase subunit secgD1871_00540Not Available-138310 - 1385678802.32
triose-phosphate isomeraseD1871_00545Not Available-138746 - 13953127158.4

Displaying genes 181 – 190 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites