Nakamurella silvestris strain DSM 102309

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Nakamurellales

Family

Nakamurellaceae

Genus

Nakamurella

Description

Nakamurella silvestris strain DSM 102309 is a Gram-positive, rod-shaped bacterium characterized by its non-spore-forming nature and its capacity as an organotrophic chemotroph. The optimal growth temperature for this strain is 25.0°C, indicating a preference for mesophilic conditions. As an organotroph, N. silvestris utilizes organic compounds as its primary energy source, which suggests its potential involvement in the decomposition of organic matter in its native habitat. The classification of N. silvestris within the broader context of microbial ecology highlights its role in nutrient cycling, particularly in environments where organic substrates are abundant. By utilizing organic materials for energy, this strain may contribute to the microbial community's overall metabolic diversity and functionality. Furthermore, the non-spore-forming characteristic of N. silvestris implies that it may rely on environmental stability for survival, potentially influencing its ecological niche and interactions with other microorganisms. As such, this bacterium could play a significant role in the dynamics of microbial communities, particularly in the decomposition processes within soil or similar environments where organic matter is prevalent.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderNakamurellales
FamilyNakamurellaceae
GenusNakamurella
SpeciesNakamurella silvestris
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Nakamurella silvestris strain DSM 102309

Accession NumberQXCQ00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dead/deah box helicaseD1871_00290Not Available-75883 - 7764063912.1
nicotinamide riboside transporter pnucD1871_00295Not Available+77848 - 7857026655.4
ynfa family proteinD1871_00300Not Available-78454 - 7878911761.7
glyoxalaseD1871_00305Not Available-78786 - 7918714778.9
pyridoxamine 5'-phosphate oxidase family proteinD1871_00310Not Available-79245 - 7974818056.4
shoct domain-containing proteinD1871_00315Not Available+79826 - 8050923863.6
cca trna nucleotidyltransferaseD1871_00320Not Available+80632 - 8202951040.1
polyphosphate kinase 2D1871_00325Not Available-82049 - 8296935673.1
mfs transporterD1871_00330Not Available-83269 - 8462747105.4
hypothetical proteinD1871_00335Not Available+84824 - 8533918468.9

Displaying genes 141 – 150 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites