Desulfotomaculum sp. OF05-3

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Desulfotomaculaceae

Genus

Desulfotomaculum

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyDesulfotomaculaceae
GenusDesulfotomaculum
SpeciesDesulfotomaculum sp. OF05-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfotomaculum sp. OF05-3

Accession NumberQWGO00000000.1

Gene Summary

Adenine Count

978776 bp

Thymine Count

958240 bp

Guanine Count

901609 bp

Cytosine Count

881571 bp

Genome Length

3720446 bp

Protein-coding Genes

3309 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tripartite tricarboxylate transporter tctb family proteinDXA87_05400Not Available-1149157 - 114962116834.6
tripartite tricarboxylate transporter substrate binding proteinDXA87_05405Not Available-1149735 - 115079336756.2
2-dehydro-3-deoxygalactonokinaseDXA87_05410Not Available-1150986 - 115199636410.7
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseDXA87_05415Not Available-1152020 - 115267022966.1
30s ribosomal protein s21DXA87_05420Not Available-1152894 - 11530706947.4
alanine--trna ligaseDXA87_05425Not Available-1153280 - 115593497722.3
duf1311 domain-containing proteinDXA87_05430Not Available-1156378 - 115730133488.4
rna polymerase sigma factorDXA87_05435Not Available+1157564 - 115812421647.0
hypothetical proteinDXA87_05440Not Available+1158106 - 115889129164.3
shikimate dehydrogenaseDXA87_05445Not Available-1159093 - 116008235800.0

Displaying genes 1071 – 1080 of 3413 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

30 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001341chloroacetateC2H2ClO2Chemical structure of chloroacetateNot available
Average93.49Da
Monoisotopic92.9748806Da
BASm0001364p-cumateC10H11O2Chemical structure of p-cumateNot available
Average163.197Da
Monoisotopic163.076453174Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001861(2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diolC12H12O2Chemical structure of (2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diolNot available
Average188.226Da
Monoisotopic188.0837296Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002131(3S)-hydroxy-3-methylglutaryl-CoAC27H39N7O20P3SChemical structure of (3S)-hydroxy-3-methylglutaryl-CoANot available
Average906.62Da
Monoisotopic906.1183419Da
BASm00026073-methyl-(2E)-butenoyl-CoAC26H38N7O17P3SChemical structure of 3-methyl-(2E)-butenoyl-CoANot available
Average845.61Da
Monoisotopic845.1279693Da

Displaying 1–10 of 30 metabolites