Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter nebraskensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
407143 bp
Thymine Count
405656 bp
Guanine Count
1082169 bp
Cytosine Count
1087568 bp
Genome Length
2982539 bp
Protein-coding Genes
3293 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DZF97_00005 | Not Available | + | 1 - 594 | 20476.3 |
| 5s ribosomal rna | Not Available | Not Available | + | 312 - 428 | Not Available |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 2128 - 2224 | Not Available |
| murein biosynthesis integral membrane protein murj | DZF97_00020 | Not Available | + | 3207 - 4838 | 56595.4 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 3742 - 4123 | Not Available |
| thioredoxin-disulfide reductase | DZF97_00025 | Not Available | + | 4995 - 6032 | 36244.7 |
| thioredoxin | DZF97_00030 | Not Available | + | 6114 - 6437 | 11747.2 |
| plp-dependent aminotransferase family protein | DZF97_00035 | Not Available | + | 6583 - 7905 | 48050.4 |
| d-alanine--d-alanine ligase | DZF97_00040 | Not Available | + | 7949 - 8914 | 33360.7 |
| parb/repb/spo0j family partition protein | DZF97_00045 | Not Available | - | 8982 - 9983 | 36028.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
