Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | strain AM42-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_00085 | Not Available | Positive | 14340 - 15560 | 45547.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 15263 - 15371 | Not Available |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 15500 - 15859 | Not Available |
| universal stress protein | DW921_00090 | Not Available | Negative | 15786 - 16919 | 43381.5 |
| dna-binding protein | DW921_00095 | Not Available | Negative | 17033 - 17287 | 9307.17 |
| phosphatase pap2 family protein | DW921_00100 | Not Available | Negative | 17412 - 18119 | 26553.9 |
| tetratricopeptide repeat protein | DW921_00105 | Not Available | Negative | 18134 - 18889 | 28369.6 |
| protein batd | DW921_00110 | Not Available | Negative | 18910 - 20742 | 67913.5 |
| tetratricopeptide repeat protein | DW921_00115 | Not Available | Negative | 20813 - 21508 | 27090.0 |
| vwa domain-containing protein | DW921_00120 | Not Available | Negative | 21517 - 22536 | 37887.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
