Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine dehydratase | DU478_02345 | Not Available | Positive | 504640 - 505557 | 30830.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DU478_02350 | Not Available | Positive | 505640 - 506467 | 29577.3 |
| n-(5'-phosphoribosyl)anthranilate isomerase | DU478_02355 | Not Available | Negative | 506652 - 506879 | 8604.66 |
| sodium:calcium antiporter | DU478_02360 | Not Available | Positive | 506952 - 507980 | 35380.6 |
| hypothetical protein | DU478_02365 | Not Available | Positive | 508026 - 508373 | 12190.3 |
| hypothetical protein | DU478_02370 | Not Available | Negative | 508375 - 509448 | 39194.5 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | DU478_02375 | Not Available | Negative | 509445 - 511019 | 55559.6 |
| succinyl-diaminopimelate desuccinylase | DU478_02380 | Not Available | Positive | 511294 - 512442 | 40483.7 |
| glycosyltransferase | DU478_02385 | Not Available | Positive | 512444 - 513037 | 21343.2 |
| ribonuclease r | DU478_02390 | Not Available | Positive | 513111 - 515393 | 83305.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.