Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hcp1 family type vi secretion system effector | DU478_20690 | Not Available | - | 4400397 - 4400885 | 17643.0 |
| type vi secretion system contractile sheath large subunit | DU478_20695 | Not Available | - | 4400918 - 4402426 | 55698.1 |
| type vi secretion system contractile sheath small subunit | DU478_20700 | Not Available | - | 4402430 - 4402963 | 19682.5 |
| type vi secretion system protein tssa | DU478_20705 | Not Available | - | 4402998 - 4404137 | 40259.7 |
| duf4384 domain-containing protein | DU478_20710 | Not Available | - | 4404266 - 4405903 | 55809.6 |
| biopolymer transporter exbd | DU478_20715 | Not Available | - | 4405900 - 4406301 | 14012.2 |
| biopolymer transporter exbd | DU478_20720 | Not Available | - | 4406298 - 4406705 | 13826.3 |
| mota/tolq/exbb proton channel family protein | DU478_20725 | Not Available | - | 4406702 - 4407328 | 21194.3 |
| hypothetical protein | DU478_20730 | Not Available | - | 4407332 - 4407748 | 14600.8 |
| hypothetical protein | DU478_20735 | Not Available | + | 4407943 - 4408365 | 15049.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.