Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | DU478_01130 | Not Available | Negative | 248259 - 249710 | 50538.8 |
| duf3299 domain-containing protein | DU478_01135 | Not Available | Negative | 250084 - 250584 | 17622.1 |
| duf3299 domain-containing protein | DU478_01140 | Not Available | Negative | 250575 - 251078 | 18352.0 |
| abc transporter permease | DU478_01145 | Not Available | Negative | 251084 - 252334 | 44376.5 |
| abc transporter atp-binding protein | DU478_01150 | Not Available | Negative | 252331 - 253020 | 24346.3 |
| duf2796 domain-containing protein | DU478_01155 | Not Available | Negative | 253023 - 253622 | 21239.3 |
| trap transporter permease | DU478_01160 | Not Available | Negative | 254437 - 256641 | 77520.4 |
| c4-dicarboxylate abc transporter substrate-binding protein | DU478_01165 | Not Available | Negative | 256733 - 257698 | 34167.7 |
| lysr family transcriptional regulator | DU478_01170 | Not Available | Negative | 257824 - 258738 | 33095.4 |
| tartrate dehydrogenase | DU478_01175 | Not Available | Positive | 258852 - 259994 | 40778.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.