Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DU478_04355 | Not Available | Positive | 932971 - 934407 | 50532.0 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DU478_04360 | Not Available | Positive | 934422 - 935504 | 38662.2 |
| coenzyme f420 hydrogenase | DU478_04365 | Not Available | Positive | 935554 - 936801 | 45718.1 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DU478_04370 | Not Available | Positive | 936838 - 938238 | 49278.4 |
| nad(p)/fad-dependent oxidoreductase | DU478_04375 | Not Available | Negative | 938220 - 939407 | 42636.8 |
| putative lipid ii flippase ftsw | DU478_04380 | Not Available | Positive | 939556 - 940722 | 41887.4 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | DU478_04385 | Not Available | Positive | 940768 - 941907 | 39638.6 |
| udp-n-acetylmuramate--l-alanine ligase | DU478_04390 | Not Available | Positive | 941930 - 943327 | 50187.9 |
| duf2484 family protein | DU478_04395 | Not Available | Positive | 943419 - 943673 | 9075.51 |
| duf2484 family protein | DU478_04400 | Not Available | Positive | 943670 - 943924 | 9493.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.