Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | DU478_04000 | Not Available | Negative | 841563 - 846158 | 164344.0 |
| glycosyltransferase family 2 protein | DU478_04005 | Not Available | Negative | 846164 - 847177 | 36972.6 |
| sdr family nad(p)-dependent oxidoreductase | DU478_04010 | Not Available | Negative | 847182 - 853655 | 233053.0 |
| polysaccharide biosynthesis protein | DU478_04015 | Not Available | Negative | 853840 - 855204 | 48735.1 |
| glycosyltransferase | DU478_04020 | Not Available | Negative | 855201 - 856046 | 29753.5 |
| calcium-binding protein | DU478_04025 | Not Available | Negative | 856169 - 859006 | 103020.0 |
| mechanosensitive ion channel protein mscs | DU478_04030 | Not Available | Negative | 859253 - 861736 | 88571.9 |
| mlae family lipid abc transporter permease subunit | DU478_04035 | Not Available | Positive | 861934 - 863064 | 40025.5 |
| abc transporter atp-binding protein | DU478_04040 | Not Available | Positive | 863067 - 863864 | 28838.5 |
| mce family protein | DU478_04045 | Not Available | Positive | 863871 - 865610 | 61703.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.