Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DU478_03950 | Not Available | Positive | 828290 - 829657 | 49028.4 |
| glycosyltransferase | DU478_03955 | Not Available | Negative | 829816 - 830580 | 27576.7 |
| gfo/idh/moca family oxidoreductase | DU478_03960 | Not Available | Positive | 830888 - 832006 | 40760.1 |
| nad-dependent epimerase/dehydratase family protein | DU478_03965 | Not Available | Positive | 831994 - 832962 | 34293.4 |
| colanic acid biosynthesis glycosyltransferase wcal | DU478_03970 | Not Available | Positive | 832959 - 834185 | 44780.1 |
| glycosyltransferase | DU478_03975 | Not Available | Positive | 834182 - 835150 | 35531.1 |
| nad-dependent epimerase/dehydratase family protein | DU478_03980 | Not Available | Positive | 835163 - 837268 | 75980.3 |
| exopolysaccharide biosynthesis protein | DU478_03985 | Not Available | Positive | 837680 - 839332 | 60697.9 |
| chain-length determining protein | DU478_03990 | Not Available | Negative | 839372 - 840688 | 49574.0 |
| phosphopantetheinyl transferase | DU478_03995 | Not Available | Negative | 840893 - 841582 | 24175.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.