Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport periplasmic protein lpta | DU478_03650 | Not Available | Positive | 764254 - 764745 | 16974.9 |
| lps export abc transporter atp-binding protein | DU478_03655 | Not Available | Positive | 764745 - 765503 | 27992.9 |
| ribosome-associated translation inhibitor raia | DU478_03660 | Not Available | Positive | 765762 - 766328 | 20749.7 |
| pts lactose transporter subunit iic | DU478_03665 | Not Available | Positive | 766380 - 766844 | 16479.9 |
| nodulation protein nodh | DU478_03670 | Not Available | Negative | 766861 - 768291 | 53725.6 |
| glycosyl transferase | DU478_03675 | Not Available | Negative | 768298 - 769998 | 65054.9 |
| glycosyltransferase family 2 protein | DU478_03680 | Not Available | Negative | 769995 - 771005 | 39687.3 |
| glycosyltransferase family 1 protein | DU478_03685 | Not Available | Negative | 771055 - 772233 | 43322.1 |
| udp-glucose 4-epimerase gale | DU478_03690 | Not Available | Negative | 772223 - 773206 | 35904.2 |
| utp--glucose-1-phosphate uridylyltransferase | DU478_03695 | Not Available | Negative | 773213 - 774106 | 32482.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.