Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | DU478_03350 | Not Available | Positive | 698237 - 698671 | 15538.3 |
| deda family protein | DU478_03355 | Not Available | Negative | 698676 - 699119 | 16117.9 |
| nyn domain-containing protein | DU478_03360 | Not Available | Negative | 699148 - 699723 | 21965.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DU478_03365 | Not Available | Positive | 699865 - 700449 | 20986.2 |
| dna-directed rna polymerase subunit omega | DU478_03370 | Not Available | Positive | 700514 - 700867 | 13012.2 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DU478_03375 | Not Available | Positive | 700900 - 703041 | 79920.6 |
| duf2062 domain-containing protein | DU478_03380 | Not Available | Positive | 703069 - 703719 | 24551.2 |
| pyridoxine 5'-phosphate synthase | DU478_03385 | Not Available | Positive | 703748 - 704500 | 27360.7 |
| nucleoside deaminase | DU478_03390 | Not Available | Positive | 704504 - 704962 | 16365.6 |
| holo-acp synthase | DU478_03395 | Not Available | Positive | 704959 - 705372 | 15000.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
