Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | DU478_03300 | Not Available | Negative | 691320 - 691817 | 17737.4 |
| peptide deformylase | DU478_03305 | Not Available | Negative | 691814 - 692332 | 19493.7 |
| putative c-s lyase | DU478_03310 | Not Available | Positive | 692447 - 693625 | 43228.2 |
| trimeric intracellular cation channel family protein | DU478_03315 | Not Available | Negative | 693825 - 694448 | 21476.6 |
| ribonuclease hi | DU478_03320 | Not Available | Negative | 694504 - 694974 | 17165.3 |
| class i sam-dependent methyltransferase | DU478_03325 | Not Available | Negative | 694967 - 695563 | 20752.6 |
| duf3429 domain-containing protein | DU478_03330 | Not Available | Negative | 695560 - 696009 | 15714.9 |
| lyse family translocator | DU478_03335 | Not Available | Negative | 696009 - 696623 | 21783.3 |
| pyridoxamine 5'-phosphate oxidase | DU478_03340 | Not Available | Negative | 696675 - 697148 | 17463.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DU478_03345 | Not Available | Negative | 697148 - 698098 | 34268.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.