Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter permease | DU478_02600 | Not Available | Positive | 559002 - 560504 | 52260.7 |
| pig-l family deacetylase | DU478_02605 | Not Available | Positive | 560508 - 561224 | 26753.6 |
| mandelate racemase/muconate lactonizing enzyme family protein | DU478_02610 | Not Available | Negative | 561264 - 562349 | 37247.7 |
| abrb family transcriptional regulator | DU478_02615 | Not Available | Negative | 562346 - 563428 | 37202.9 |
| sdr family nad(p)-dependent oxidoreductase | DU478_02620 | Not Available | Negative | 563458 - 564198 | 25545.6 |
| fcd domain-containing protein | DU478_02625 | Not Available | Positive | 564253 - 565032 | 28722.5 |
| tripartite tricarboxylate transporter substrate binding protein | DU478_02630 | Not Available | Positive | 565130 - 566119 | 35020.1 |
| tripartite tricarboxylate transporter tctb family protein | DU478_02635 | Not Available | Positive | 566194 - 566640 | 16195.5 |
| tripartite tricarboxylate transporter permease | DU478_02640 | Not Available | Positive | 566663 - 568189 | 53187.5 |
| ldh family oxidoreductase | DU478_02645 | Not Available | Positive | 568090 - 569220 | 38671.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.