Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate reductase | DU478_02500 | Not Available | Negative | 542238 - 542600 | 12891.1 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DU478_02505 | Not Available | Negative | 542712 - 543530 | 28219.6 |
| 30s ribosome-binding factor rbfa | DU478_02510 | Not Available | Positive | 543628 - 544023 | 14905.9 |
| hypothetical protein | DU478_02515 | Not Available | Positive | 544023 - 544760 | 26509.6 |
| hypothetical protein | DU478_02520 | Not Available | Positive | 544874 - 545812 | 30517.3 |
| tldd/pmba family protein | DU478_02525 | Not Available | Positive | 545994 - 547340 | 47057.2 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | DU478_02530 | Not Available | Positive | 547327 - 548121 | 28328.3 |
| 3-deoxy-d-manno-octulosonic acid transferase | DU478_02535 | Not Available | Positive | 548205 - 549404 | 42556.6 |
| tetraacyldisaccharide 4'-kinase | DU478_02540 | Not Available | Positive | 549404 - 550399 | 34972.4 |
| n-formylglutamate amidohydrolase | DU478_02545 | Not Available | Negative | 550416 - 551276 | 31836.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.