Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic murein transglycosylase | DU478_02395 | Not Available | Positive | 515495 - 516859 | 48950.9 |
| rna pyrophosphohydrolase | DU478_02405 | Not Available | Negative | 517328 - 517810 | 18378.8 |
| s41 family peptidase | DU478_02410 | Not Available | Negative | 517986 - 519326 | 47827.0 |
| peptidase m23 | DU478_02415 | Not Available | Negative | 519332 - 520459 | 39062.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DU478_02420 | Not Available | Negative | 520456 - 521991 | 53830.0 |
| carbamoyl-phosphate synthase large subunit | DU478_02425 | Not Available | Negative | 522294 - 525638 | 120920.0 |
| plp-dependent aminotransferase family protein | DU478_02430 | Not Available | Positive | 525882 - 527366 | 54266.9 |
| fad-dependent oxidoreductase | DU478_02435 | Not Available | Negative | 527363 - 528397 | 35867.9 |
| fad-dependent oxidoreductase | DU478_02440 | Not Available | Positive | 528446 - 529114 | 24459.8 |
| dmt family transporter | DU478_02445 | Not Available | Positive | 529111 - 529983 | 31416.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.