Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | DU478_20640 | Not Available | + | 4385728 - 4388049 | 85507.8 |
| type vi secretion system-associated protein tagf | DU478_20645 | Not Available | - | 4388021 - 4388530 | 17521.2 |
| type vi secretion system membrane subunit tssm | DU478_20650 | Not Available | - | 4388534 - 4392073 | 128097.0 |
| type vi secretion system protein tssl | DU478_20655 | Not Available | - | 4392077 - 4393414 | 48013.4 |
| type vi secretion system baseplate subunit tssk | DU478_20660 | Not Available | - | 4393419 - 4394750 | 47675.9 |
| type vi secretion system lipoprotein tssj | DU478_20665 | Not Available | - | 4394772 - 4395224 | 14836.9 |
| type vi secretion system-associated fha domain protein tagh | DU478_20670 | Not Available | - | 4395229 - 4396737 | 54249.8 |
| type vi secretion system baseplate subunit tssg | DU478_20675 | Not Available | - | 4396734 - 4397780 | 37447.7 |
| type vi secretion system baseplate subunit tssf | DU478_20680 | Not Available | - | 4397744 - 4399621 | 68869.6 |
| type vi secretion system baseplate subunit tsse | DU478_20685 | Not Available | - | 4399621 - 4400301 | 25178.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.