Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyl transferase abieii/abigii toxin family protein | DU478_19245 | Not Available | Negative | 4099367 - 4100392 | 38144.1 |
| hypothetical protein | DU478_19250 | Not Available | Negative | 4100389 - 4100985 | 21503.8 |
| hypothetical protein | DU478_19255 | Not Available | Positive | 4101117 - 4101923 | 31733.5 |
| hypothetical protein | DU478_19260 | Not Available | Positive | 4101913 - 4102461 | 20124.2 |
| imma/irre family metallo-endopeptidase | DU478_19265 | Not Available | Positive | 4102448 - 4105843 | 124843.0 |
| hypothetical protein | DU478_19270 | Not Available | Positive | 4105913 - 4106764 | 31909.8 |
| thiamine biosynthesis protein thif | DU478_19275 | Not Available | Positive | 4106761 - 4108155 | 50443.3 |
| hypothetical protein | DU478_19280 | Not Available | Positive | 4108157 - 4108528 | 14305.3 |
| hypothetical protein | DU478_19285 | Not Available | Positive | 4108602 - 4109303 | 27422.7 |
| smc-scp complex subunit scpb | DU478_19290 | Not Available | Negative | 4109358 - 4109954 | 21786.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.