Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU478_18920 | Not Available | Negative | 4034834 - 4035076 | 9000.15 |
| sdr family nad(p)-dependent oxidoreductase | DU478_18925 | Not Available | Positive | 4035267 - 4036121 | 30311.8 |
| alpha-amylase | DU478_18930 | Not Available | Positive | 4036060 - 4037664 | 59605.1 |
| ai-2e family transporter | DU478_18935 | Not Available | Positive | 4037769 - 4038854 | 39153.9 |
| prc-barrel domain containing protein | DU478_18940 | Not Available | Positive | 4038980 - 4040407 | 50228.2 |
| mechanosensitive ion channel family protein | DU478_18945 | Not Available | Negative | 4040514 - 4041710 | 44783.4 |
| gluconate 2-dehydrogenase subunit 3 family protein | DU478_18950 | Not Available | Positive | 4042197 - 4042892 | 25151.2 |
| gmc family oxidoreductase | DU478_18955 | Not Available | Positive | 4042896 - 4044680 | 66414.1 |
| cytochrome c4 | DU478_18960 | Not Available | Positive | 4044693 - 4045478 | 27901.8 |
| cytochrome c | DU478_18965 | Not Available | Positive | 4045705 - 4046013 | 10488.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.