Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pin domain-containing protein | DU478_18490 | Not Available | - | 3943802 - 3944206 | 14540.4 |
| abrb/maze/spovt family dna-binding domain-containing protein | DU478_18495 | Not Available | - | 3944196 - 3944423 | 8499.25 |
| plasmid partitioning protein repa | DU478_18500 | Not Available | + | 3944641 - 3945828 | 43918.5 |
| plasmid partitioning protein repb | DU478_18505 | Not Available | + | 3945825 - 3946823 | 36099.6 |
| replication initiation protein | DU478_18510 | Not Available | + | 3947006 - 3948217 | 44915.8 |
| c4-dicarboxylate abc transporter permease | DU478_18515 | Not Available | - | 3948852 - 3950081 | 42918.2 |
| tripartite tricarboxylate transporter tctb family protein | DU478_18520 | Not Available | - | 3950083 - 3950532 | 15807.2 |
| gntr family transcriptional regulator | DU478_18530 | Not Available | - | 3951520 - 3952251 | 26807.0 |
| 2-pyrone-4,6-dicarboxylate hydrolase | DU478_18535 | Not Available | + | 3952333 - 3953127 | 28187.8 |
| nad-dependent succinate-semialdehyde dehydrogenase | DU478_18540 | Not Available | - | 3953213 - 3954643 | 50383.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.