Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU478_18415 | Not Available | Negative | 3931896 - 3932099 | 7542.14 |
| sensor histidine kinase | DU478_18420 | Not Available | Positive | 3932283 - 3933869 | 57295.9 |
| dna-binding response regulator | DU478_18425 | Not Available | Positive | 3933879 - 3934568 | 24936.8 |
| pyrroloquinoline quinone precursor peptide pqqa | DU478_18430 | Not Available | Positive | 3934682 - 3934771 | 3359.1 |
| pyrroloquinoline quinone biosynthesis protein pqqb | DU478_18435 | Not Available | Positive | 3934794 - 3935690 | 31623.7 |
| pyrroloquinoline quinone biosynthesis protein pqqc | DU478_18440 | Not Available | Positive | 3935687 - 3936436 | 28146.1 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | DU478_18445 | Not Available | Positive | 3936436 - 3936708 | 10099.0 |
| pyrroloquinoline quinone biosynthesis protein pqqe | DU478_18450 | Not Available | Positive | 3936708 - 3937832 | 40918.9 |
| adenosylcobinamide-gdp ribazoletransferase | DU478_18475 | Not Available | Positive | 3940921 - 3941664 | 25067.3 |
| integrase | DU478_18485 | Not Available | Positive | 3942330 - 3943445 | 41062.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.