Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | DU478_16935 | Not Available | Positive | 3650172 - 3651200 | 37051.3 |
| dmt family transporter | DU478_16940 | Not Available | Negative | 3651322 - 3652293 | 34587.4 |
| abc transporter atp-binding protein | DU478_16945 | Not Available | Positive | 3652403 - 3653338 | 33918.0 |
| abc transporter permease | DU478_16950 | Not Available | Positive | 3653335 - 3654096 | 27931.0 |
| mfs transporter | DU478_16955 | Not Available | Positive | 3654208 - 3655440 | 45346.6 |
| sss family solute/sodium (na+) symporter | DU478_16960 | Not Available | Negative | 3655443 - 3657038 | 57468.5 |
| 50s ribosomal protein l11 methyltransferase | DU478_16965 | Not Available | Positive | 3657513 - 3658382 | 30570.2 |
| hypothetical protein | DU478_16970 | Not Available | Positive | 3658491 - 3658835 | 12712.7 |
| duf1127 domain-containing protein | DU478_16975 | Not Available | Negative | 3658983 - 3659192 | 7628.26 |
| crossover junction endodeoxyribonuclease ruvc | DU478_16980 | Not Available | Positive | 3659517 - 3660005 | 17078.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.