Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-phosphate deacetylase | DU478_16715 | Not Available | Negative | 3603716 - 3604846 | 38333.9 |
| sis domain-containing protein | DU478_16720 | Not Available | Negative | 3604843 - 3605871 | 35423.1 |
| gntr family transcriptional regulator | DU478_16725 | Not Available | Negative | 3605874 - 3606632 | 27928.2 |
| n-acetylglucosamine kinase | DU478_16730 | Not Available | Negative | 3606629 - 3607519 | 30292.7 |
| n-acetylmuramic acid 6-phosphate etherase | DU478_16735 | Not Available | Positive | 3607650 - 3608573 | 30997.5 |
| carbohydrate abc transporter substrate-binding protein | DU478_16740 | Not Available | Positive | 3608598 - 3609863 | 45818.7 |
| sugar abc transporter permease | DU478_16745 | Not Available | Positive | 3609934 - 3610857 | 34438.7 |
| carbohydrate abc transporter permease | DU478_16750 | Not Available | Positive | 3610870 - 3611709 | 30528.6 |
| gfo/idh/moca family oxidoreductase | DU478_16755 | Not Available | Positive | 3611822 - 3612850 | 36894.6 |
| abc transporter atp-binding protein | DU478_16760 | Not Available | Positive | 3612847 - 3613857 | 36320.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.