Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | DU478_16615 | Not Available | Positive | 3580817 - 3582220 | 50209.3 |
| hypothetical protein | DU478_16620 | Not Available | Negative | 3582989 - 3583237 | 8961.72 |
| Trna-ser | Not Available | Not Available | Positive | 3583660 - 3583749 | Not Available |
| duf3299 domain-containing protein | DU478_16630 | Not Available | Positive | 3584187 - 3584699 | 18593.2 |
| amidase | DU478_16635 | Not Available | Negative | 3584824 - 3586107 | 44449.6 |
| abc transporter substrate-binding protein | DU478_16640 | Not Available | Positive | 3586536 - 3587618 | 39395.4 |
| permease | DU478_16645 | Not Available | Positive | 3587745 - 3588716 | 35407.9 |
| c4-dicarboxylate abc transporter permease | DU478_16650 | Not Available | Positive | 3588741 - 3591383 | 94748.0 |
| d-lyxose/d-mannose family sugar isomerase | DU478_16655 | Not Available | Negative | 3591397 - 3592083 | 25151.6 |
| plp-dependent aminotransferase family protein | DU478_16660 | Not Available | Negative | 3592131 - 3593492 | 48800.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.