Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | DVG78_00350 | Not Available | + | 79241 - 80329 | 41364.8 |
| shikimate kinase | DVG78_00355 | Not Available | + | 80397 - 80915 | 19777.8 |
| 5s ribosomal rna | Not Available | Not Available | + | 80604 - 80715 | Not Available |
| class i sam-dependent methyltransferase | DVG78_00360 | Not Available | + | 81015 - 81659 | 24802.2 |
| hypothetical protein | DVG78_00365 | Not Available | + | 81667 - 82917 | 47869.3 |
| hypothetical protein | DVG78_00370 | Not Available | + | 82982 - 84232 | 47391.5 |
| diaminopimelate epimerase | DVG78_00375 | Not Available | - | 84259 - 85047 | 29011.2 |
| 50s ribosomal protein l19 | DVG78_00380 | Not Available | - | 85127 - 85483 | 13125.1 |
| methylenetetrahydrofolate reductase | DVG78_00385 | Not Available | + | 85731 - 86690 | 36178.8 |
| hypothetical protein | DVG78_00390 | Not Available | - | 86756 - 87082 | 11720.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.