Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella aurantiaca |
| Strain | strain YX9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1981224 bp
Thymine Count
2000232 bp
Guanine Count
1623539 bp
Cytosine Count
1606816 bp
Genome Length
7211915 bp
Protein-coding Genes
5859 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | DVG78_00200 | Not Available | - | 50877 - 51509 | 21899.5 |
| udp-2,3-diacylglucosamine diphosphatase | DVG78_00205 | Not Available | + | 51782 - 52600 | 31862.4 |
| lysm domain-containing protein | DVG78_00210 | Not Available | - | 52601 - 53311 | 25996.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DVG78_00215 | Not Available | - | 53441 - 53935 | 17228.2 |
| sterol desaturase family protein | DVG78_00220 | Not Available | + | 54053 - 54964 | 35400.9 |
| laci family transcriptional regulator | DVG78_00225 | Not Available | - | 55027 - 56085 | 39304.1 |
| inositol oxygenase | DVG78_00230 | Not Available | - | 56173 - 57057 | 34861.6 |
| methylmalonyl-coa epimerase | DVG78_00235 | Not Available | + | 57271 - 57675 | 15038.2 |
| lysoplasmalogenase | DVG78_00240 | Not Available | + | 57745 - 58455 | 26601.3 |
| cold-shock protein | DVG78_00245 | Not Available | - | 58496 - 58687 | 6934.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.