Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DUE52_20875 | Not Available | - | 5197337 - 5199721 | 88194.7 |
| ld-carboxypeptidase | DUE52_20880 | Not Available | - | 5199921 - 5200943 | 37000.2 |
| glucosamine-6-phosphate deaminase | DUE52_20885 | Not Available | + | 5201127 - 5203085 | 73169.0 |
| class i sam-dependent methyltransferase | DUE52_20890 | Not Available | + | 5203259 - 5204011 | 29035.5 |
| glycosyltransferase | DUE52_20895 | Not Available | + | 5204008 - 5205330 | 49124.7 |
| class i sam-dependent methyltransferase | DUE52_20900 | Not Available | - | 5205346 - 5206083 | 28054.6 |
| glycosyltransferase | DUE52_20905 | Not Available | + | 5206142 - 5206891 | 28635.6 |
| malto-oligosyltrehalose trehalohydrolase | DUE52_20910 | Not Available | - | 5206888 - 5208753 | 70072.6 |
| duf3459 domain-containing protein | DUE52_20915 | Not Available | - | 5208760 - 5210367 | 61537.2 |
| hypothetical protein | DUE52_20920 | Not Available | - | 5210454 - 5210714 | 9938.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.