Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3276 family protein | DUE52_20775 | Not Available | - | 5167304 - 5167627 | 12914.1 |
| septal ring lytic transglycosylase rlpa family protein | DUE52_20780 | Not Available | + | 5167893 - 5168339 | 16043.8 |
| duf58 domain-containing protein | DUE52_20785 | Not Available | + | 5168497 - 5169408 | 35321.3 |
| duf5106 domain-containing protein | DUE52_20790 | Not Available | - | 5169456 - 5170892 | 54253.4 |
| ydcf family protein | DUE52_20795 | Not Available | + | 5170974 - 5171744 | 28607.4 |
| 6-phosphofructokinase | DUE52_20800 | Not Available | - | 5171741 - 5172715 | 34857.1 |
| pap2 family protein | DUE52_20805 | Not Available | - | 5172929 - 5173588 | 23443.3 |
| malto-oligosyltrehalose synthase | DUE52_20810 | Not Available | - | 5173900 - 5178135 | 162278.0 |
| ferritin-like domain-containing protein | DUE52_20815 | Not Available | - | 5178446 - 5178961 | 18636.0 |
| sensor histidine kinase | DUE52_20820 | Not Available | + | 5179186 - 5180445 | 47156.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.