Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DUE52_20720 | Not Available | - | 5156084 - 5157301 | 46479.7 |
| Trna-thr | Not Available | Not Available | + | 5157830 - 5157902 | Not Available |
| abc transporter atp-binding protein | DUE52_20735 | Not Available | + | 5157959 - 5160001 | 76937.6 |
| duf3667 domain-containing protein | DUE52_20740 | Not Available | - | 5160011 - 5160814 | 30423.3 |
| hypothetical protein | DUE52_20745 | Not Available | - | 5160874 - 5161797 | 35544.4 |
| duf5103 domain-containing protein | DUE52_20750 | Not Available | + | 5161906 - 5163222 | 51150.4 |
| class a beta-lactamase-related serine hydrolase | DUE52_20755 | Not Available | - | 5163224 - 5164384 | 42710.3 |
| hypothetical protein | DUE52_20760 | Not Available | - | 5164403 - 5165011 | 22760.6 |
| lyttr family transcriptional regulator | DUE52_20765 | Not Available | - | 5165125 - 5165952 | 32359.4 |
| redox-regulated atpase ychf | DUE52_20770 | Not Available | - | 5166011 - 5167114 | 40349.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.