Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | DUE52_11080 | Not Available | - | 2748359 - 2749225 | 31155.7 |
| aminotransferase class v-fold plp-dependent enzyme | DUE52_11085 | Not Available | + | 2749385 - 2750512 | 40654.4 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_11090 | Not Available | - | 2750509 - 2751369 | 31914.4 |
| cysteine desulfurase | DUE52_11095 | Not Available | - | 2751554 - 2752723 | 42595.6 |
| phosphoglucosamine mutase | DUE52_11100 | Not Available | - | 2752879 - 2754288 | 50982.3 |
| transglutaminase family protein | DUE52_11105 | Not Available | - | 2754466 - 2755308 | 31921.7 |
| peptidase | DUE52_11110 | Not Available | - | 2755345 - 2756070 | 27083.2 |
| nudix hydrolase | DUE52_11115 | Not Available | + | 2756323 - 2756997 | 25605.7 |
| Trna-arg | Not Available | Not Available | + | 2757125 - 2757199 | Not Available |
| site-specific integrase | DUE52_11125 | Not Available | + | 2757264 - 2758571 | 50334.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.