Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | DUE52_10580 | Not Available | + | 2609935 - 2610651 | 26188.9 |
| ribosome recycling factor | DUE52_10585 | Not Available | + | 2610773 - 2611333 | 20981.4 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_10590 | Not Available | - | 2611503 - 2613188 | 63156.7 |
| tonb-dependent receptor | DUE52_10595 | Not Available | - | 2613273 - 2616287 | 108356.0 |
| duf4982 domain-containing protein | DUE52_10600 | Not Available | - | 2616716 - 2619142 | 90260.3 |
| hypothetical protein | DUE52_10605 | Not Available | - | 2619276 - 2619542 | 9787.63 |
| transporter | DUE52_10610 | Not Available | - | 2619851 - 2620330 | 17629.0 |
| yeee/yede family protein | DUE52_10615 | Not Available | - | 2620348 - 2620920 | 20524.7 |
| mbl fold metallo-hydrolase | DUE52_10620 | Not Available | - | 2620964 - 2622382 | 51236.2 |
| sulfite exporter taue/safe family protein | DUE52_10625 | Not Available | - | 2622498 - 2623298 | 28305.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.