Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Larkinella punicea strain ZZJ9
Accession NumberQOWE00000000.1
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycogen debranching enzyme glgx | DUE52_05675 | Not Available | + | 1408587 - 1410689 | 79307.7 |
| duf3891 family protein | DUE52_05680 | Not Available | - | 1410768 - 1411496 | 28403.7 |
| pyridoxamine 5'-phosphate oxidase | DUE52_05685 | Not Available | - | 1411577 - 1412080 | 18909.1 |
| four-helix bundle copper-binding protein | DUE52_05690 | Not Available | - | 1412451 - 1412855 | 15508.8 |
| hypothetical protein | DUE52_05695 | Not Available | - | 1412942 - 1413136 | 7343.81 |
| pas domain s-box protein | DUE52_05700 | Not Available | - | 1413414 - 1414877 | 55301.0 |
| response regulator | DUE52_05705 | Not Available | - | 1414861 - 1415310 | 17117.3 |
| port family protein | DUE52_05710 | Not Available | + | 1415629 - 1416255 | 22391.8 |
| sigma-54-dependent fis family transcriptional regulator | DUE52_05715 | Not Available | - | 1416313 - 1417761 | 53923.9 |
| response regulator | DUE52_05720 | Not Available | - | 1417810 - 1418175 | 13603.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.