Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Larkinella punicea strain ZZJ9
Accession NumberQOWE00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coagulation factor 5/8 type domain protein | DUE52_00485 | Not Available | - | 135602 - 137389 | 68485.8 |
| pas domain s-box protein | DUE52_00490 | Not Available | + | 137756 - 139450 | 64240.0 |
| sulfatase | DUE52_00495 | Not Available | - | 139456 - 140985 | 55981.8 |
| alpha-galactosidase | DUE52_00500 | Not Available | - | 141023 - 143029 | 74755.1 |
| alpha-galactosidase | DUE52_00505 | Not Available | - | 143127 - 145166 | 75282.1 |
| glycoside hydrolase family 92 protein | DUE52_00510 | Not Available | - | 145222 - 147612 | 90007.2 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_00515 | Not Available | - | 147732 - 149609 | 69087.9 |
| susc/raga family tonb-linked outer membrane protein | DUE52_00520 | Not Available | - | 149634 - 152975 | 122869.0 |
| fecr family protein | DUE52_00525 | Not Available | - | 153194 - 154276 | 41178.5 |
| rna polymerase sigma-70 factor | DUE52_00530 | Not Available | - | 154310 - 154978 | 26370.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.