Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella arboricola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Larkinella arboricola strain DSM 21851
Accession NumberQLMC00000000.1
Gene Summary
Adenine Count
1685171 bp
Thymine Count
1695500 bp
Guanine Count
1845912 bp
Cytosine Count
1789644 bp
Genome Length
7020148 bp
Protein-coding Genes
5667 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | LX87_04548 | Not Available | - | 5543475 - 5544305 | 30672.9 |
| neutral/alkaline ceramidase-like enzyme | LX87_04549 | Not Available | - | 5544317 - 5545645 | 48602.7 |
| putative membrane-bound dehydrogenase-like protein | LX87_04550 | Not Available | - | 5545661 - 5548708 | 111577.0 |
| putative outer membrane starch-binding protein | LX87_04551 | Not Available | - | 5548719 - 5550365 | 61313.4 |
| tonb-linked susc/raga family outer membrane protein | LX87_04552 | Not Available | - | 5550385 - 5553840 | 126663.0 |
| fecr family protein | LX87_04553 | Not Available | - | 5553860 - 5554858 | 38346.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | LX87_04554 | Not Available | - | 5554928 - 5555602 | 26120.1 |
| phospho-acceptor domain-containing protein | LX87_04555 | Not Available | - | 5555893 - 5557485 | 59135.6 |
| chey-like chemotaxis protein | LX87_04556 | Not Available | + | 5557774 - 5558256 | 18505.3 |
| fkbp-type peptidyl-prolyl isomerase-like protein | LX87_04557 | Not Available | - | 5558383 - 5559279 | 32927.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.