Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein c (pspc) family protein | LV84_00011 | Not Available | + | 13249 - 15237 | 74857.0 |
| metallo-beta-lactamase family protein | LV84_00012 | Not Available | + | 17825 - 19225 | 52412.2 |
| hypothetical protein | LV84_00013 | Not Available | + | 19273 - 19740 | 16987.6 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV84_00014 | Not Available | + | 20585 - 21154 | 22036.5 |
| hypothetical protein | LV84_00015 | Not Available | + | 21147 - 21947 | 29604.2 |
| outer membrane protein with beta-barrel domain | LV84_00016 | Not Available | + | 21980 - 23011 | 38814.1 |
| hypothetical protein | LV84_00017 | Not Available | + | 23187 - 23987 | 29897.7 |
| putative adhesin | LV84_00018 | Not Available | + | 24000 - 24929 | 31979.6 |
| nitrate/nitrite transporter nark | LV84_00019 | Not Available | - | 25197 - 26387 | 42554.6 |
| l-glyceraldehyde 3-phosphate reductase | LV84_00020 | Not Available | - | 26384 - 27403 | 37796.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.