Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_1011 | Not Available | + | 1 - 1063 | 39520.0 |
| ipt/tig domain-containing protein | B0O44_1012 | Not Available | + | 1097 - 3307 | 76572.7 |
| crp-like camp-binding protein | B0O44_1013 | Not Available | - | 3368 - 4348 | 37181.1 |
| gliding motility-associated-like protein | B0O44_1014 | Not Available | + | 4487 - 8371 | 136434.0 |
| type ix secretion system porp/sprf family membrane protein | B0O44_1015 | Not Available | + | 8398 - 9288 | 32394.4 |
| hypothetical protein | B0O44_1016 | Not Available | + | 9433 - 10233 | 29045.5 |
| carboxypeptidase-like protein | B0O44_1017 | Not Available | + | 10274 - 13108 | 104496.0 |
| hypothetical protein | B0O44_1018 | Not Available | + | 13352 - 13531 | 6483.83 |
| cytochrome c-type biogenesis protein ccsb | B0O44_1019 | Not Available | - | 13601 - 16837 | 120569.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_10110 | Not Available | + | 17141 - 17710 | 22238.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.