Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Xanthomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Xanthomarina |
| Species | Xanthomarina spongicola |
| Strain | strain DSM 22637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1085414 bp
Thymine Count
1083849 bp
Guanine Count
494136 bp
Cytosine Count
491695 bp
Genome Length
3155334 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase protein tata | LX78_00264 | Not Available | Negative | 301977 - 302159 | 6661.43 |
| murein dd-endopeptidase mepm/ murein hydrolase activator nlpd | LX78_00265 | Not Available | Positive | 302278 - 303147 | 32873.2 |
| gh3 auxin-responsive promoter | LX78_00266 | Not Available | Positive | 303147 - 304649 | 57010.5 |
| hypothetical protein | LX78_00267 | Not Available | Positive | 304677 - 306365 | 64108.1 |
| hypothetical protein | LX78_00268 | Not Available | Positive | 306380 - 307438 | 40697.8 |
| dtdp-glucose 4,6-dehydratase | LX78_00269 | Not Available | Positive | 307428 - 308483 | 40467.8 |
| glucose-1-phosphate thymidylyltransferase | LX78_00270 | Not Available | Positive | 308486 - 309355 | 32057.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | LX78_00271 | Not Available | Positive | 309352 - 309897 | 20733.7 |
| dtdp-4-dehydrorhamnose reductase | LX78_00272 | Not Available | Positive | 309907 - 310758 | 32343.4 |
| 3'(2'), 5'-bisphosphate nucleotidase | LX78_00273 | Not Available | Positive | 310931 - 311731 | 29615.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.