Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Xanthomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Xanthomarina |
| Species | Xanthomarina spongicola |
| Strain | strain DSM 22637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1085414 bp
Thymine Count
1083849 bp
Guanine Count
494136 bp
Cytosine Count
491695 bp
Genome Length
3155334 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | LX78_00234 | Not Available | + | 269766 - 270143 | 14764.2 |
| carboxyl-terminal processing protease | LX78_00235 | Not Available | + | 270150 - 271787 | 61754.3 |
| outer membrane protein ompa-like peptidoglycan-associated protein | LX78_00236 | Not Available | + | 271853 - 272704 | 32790.6 |
| elaa protein | LX78_00237 | Not Available | - | 272701 - 273144 | 17211.7 |
| ribose 5-phosphate isomerase b | LX78_00238 | Not Available | - | 273191 - 273625 | 16066.3 |
| ribonuclease r/exosome complex exonuclease dis3/rrp44 | LX78_00239 | Not Available | + | 274365 - 276602 | 85351.2 |
| putative autotransporter adhesin-like protein | LX78_00240 | Not Available | + | 276631 - 277305 | 23854.5 |
| threonine/homoserine/homoserine lactone efflux protein | LX78_00241 | Not Available | + | 277346 - 278029 | 25578.4 |
| hypothetical protein | LX78_00242 | Not Available | + | 278074 - 278424 | 13884.7 |
| Trna-cys | Not Available | Not Available | + | 278811 - 278884 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.