Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Xanthomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Xanthomarina |
| Species | Xanthomarina spongicola |
| Strain | strain DSM 22637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1085414 bp
Thymine Count
1083849 bp
Guanine Count
494136 bp
Cytosine Count
491695 bp
Genome Length
3155334 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | LX78_00194 | Not Available | + | 220534 - 221199 | 24601.2 |
| cyth domain-containing protein | LX78_00195 | Not Available | + | 221192 - 221659 | 18050.6 |
| uncharacterized protein ycii | LX78_00196 | Not Available | + | 221661 - 222188 | 19899.0 |
| putative secreted protein (por secretion system target) | LX78_00197 | Not Available | - | 222274 - 227454 | 184315.0 |
| hypothetical protein | LX78_00198 | Not Available | - | 227722 - 228321 | 23601.7 |
| class 3 adenylate cyclase | LX78_00199 | Not Available | - | 228440 - 230392 | 73306.1 |
| heme-degrading monooxygenase hmoa | LX78_00200 | Not Available | - | 230611 - 230922 | 12195.3 |
| beta-aspartyl-peptidase (threonine type) | LX78_00201 | Not Available | - | 230915 - 232009 | 39216.6 |
| aldehyde dehydrogenase (nad+) | LX78_00202 | Not Available | + | 232133 - 233686 | 55631.4 |
| abc-type fe3+/spermidine/putrescine transport system atpase subunit | LX78_00203 | Not Available | + | 233771 - 234691 | 35024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.