Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Xanthomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Xanthomarina |
| Species | Xanthomarina spongicola |
| Strain | strain DSM 22637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1085414 bp
Thymine Count
1083849 bp
Guanine Count
494136 bp
Cytosine Count
491695 bp
Genome Length
3155334 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | LX78_00115 | Not Available | Positive | 134916 - 135263 | 13382.1 |
| putative mate family efflux protein | LX78_00116 | Not Available | Positive | 135413 - 136747 | 49589.1 |
| hypothetical protein | LX78_00117 | Not Available | Positive | 136766 - 136942 | 6800.38 |
| sm-20-related protein | LX78_00118 | Not Available | Negative | 137044 - 137685 | 25096.0 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | LX78_00119 | Not Available | Positive | 137780 - 138238 | 17173.4 |
| udp-2,3-diacylglucosamine hydrolase | LX78_00120 | Not Available | Positive | 138428 - 139180 | 29403.1 |
| transmembrane secretion effector | LX78_00121 | Not Available | Negative | 139177 - 140445 | 45929.4 |
| outer membrane protein ompa-like peptidoglycan-associated protein | LX78_00122 | Not Available | Negative | 140446 - 141546 | 42096.9 |
| single-stranded-dna-specific exonuclease | LX78_00123 | Not Available | Negative | 141559 - 143250 | 63560.0 |
| putative redox protein | LX78_00124 | Not Available | Negative | 143332 - 143754 | 15847.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.