Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Xanthomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Xanthomarina |
| Species | Xanthomarina spongicola |
| Strain | strain DSM 22637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1085414 bp
Thymine Count
1083849 bp
Guanine Count
494136 bp
Cytosine Count
491695 bp
Genome Length
3155334 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | LX78_00105 | Not Available | + | 120983 - 122881 | 72278.4 |
| fe-mn family superoxide dismutase | LX78_00106 | Not Available | - | 123384 - 123992 | 22684.6 |
| atp-dependent exodnase (exonuclease v) beta subunit | LX78_00107 | Not Available | + | 124116 - 127262 | 121577.0 |
| 2-amino-3-ketobutyrate coenzyme a ligase | LX78_00108 | Not Available | + | 127284 - 128477 | 43817.9 |
| thrombospondin type 3 repeat-containing protein | LX78_00109 | Not Available | + | 128603 - 129964 | 48718.9 |
| pd-(d/e)xk nuclease superfamily protein | LX78_00110 | Not Available | + | 130031 - 132787 | 106642.0 |
| pimeloyl-acp methyl ester carboxylesterase | LX78_00111 | Not Available | + | 132787 - 133641 | 32688.7 |
| Trna-ala | Not Available | Not Available | + | 133661 - 133737 | Not Available |
| putative endonuclease | LX78_00113 | Not Available | - | 133728 - 133970 | 9621.55 |
| nucleotide-binding universal stress uspa family protein | LX78_00114 | Not Available | - | 134061 - 134858 | 29827.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.