Alcaligenes faecalis strain YBY

Gram-negativeRodAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Alcaligenes

Description

Alcaligenes faecalis strain YBY is a Gram-negative, rod-shaped bacterium primarily found in diverse environments, including fresh water, soil, and hospital settings. This strain exhibits an aerobic metabolism, indicating that it requires oxygen for growth and survival. Its presence in hospital environments suggests a potential role in both natural and artificial ecosystems, where it may interact with other microbial communities. The adaptability of A. faecalis strain YBY to various habitats—including aquatic environments and soil—highlights its ecological versatility. This organism's ability to thrive in hospital settings points to its potential significance in understanding microbial dynamics in these environments, where it may coexist with other microorganisms and contribute to the overall microbial landscape. Given its host-associated nature, further research into the interactions between A. faecalis strain YBY and other microbial species could provide insights into its ecological role and functional contributions in freshwater and hospital ecosystems. This adaptability underscores its potential importance in biogeochemical cycles and microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusAlcaligenes
SpeciesAlcaligenes faecalis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Alcaligenes faecalis strain YBY
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water; hospital environments; hospital settings; HostAssociated; soil; water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Alcaligenes faecalis strain YBY

Accession NumberQEXO00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3809 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Gp2, phage terminase, large subunit, putativeDF183_14605Not Available+3190144 - 319186564165.7
Gp4, phage portal protein, hk97 familyDF183_14610Not Available+3192007 - 319324245797.7
Putative capsid assembly protein/proteaseDF183_14615Not Available+3193239 - 319418033468.7
Gp6, major capsid head proteinDF183_14620Not Available+3194242 - 319554346078.7
Gp8, conserved hypothetical proteinDF183_14625Not Available+3195749 - 319625818385.2
Head closure proteinDF183_14630Not Available+3196264 - 319662313055.5
Hypothetical proteinDF183_14635Not Available+3196643 - 319715218524.1
Hypothetical proteinDF183_14640Not Available+3197149 - 319751413799.8
Tail proteinDF183_14645Not Available+3197560 - 319821623118.3
Hypothetical proteinDF183_14650Not Available+3198225 - 319854511650.9

Displaying genes 1 – 10 of 3954 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

273 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003566cob(I)yrinate a,c diamideC45H61CoN6O12Chemical structure of cob(I)yrinate a,c diamideNot available
Average936.932Da
Monoisotopic936.3679466Da
BASm00036917,8-dihydroneopterin 3'-phosphateC9H12N5O7PChemical structure of 7,8-dihydroneopterin 3'-phosphateNot available
Average333.1946Da
Monoisotopic333.047434275Da
BASm00036954-phospho-D-erythronateC4H6O8PChemical structure of 4-phospho-D-erythronateNot available
Average213.059Da
Monoisotopic212.9816749Da
BASm0003810propanoyl phosphateC3H5O5PChemical structure of propanoyl phosphate121-69-7
Average152.043Da
Monoisotopic151.9885574Da
BASm0003903D-glycero-D-manno-heptose 1-phosphateC7H13O10PChemical structure of D-glycero-D-manno-heptose 1-phosphateNot available
Average288.1459Da
Monoisotopic288.024633148Da
BASm0003926sirohemeC42H36FeN4O16Not available52553-42-1
Average908.611Da
Monoisotopic908.151956Da
BASm00039463-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoateC9H11O4Chemical structure of 3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoateNot available
Average183.1812Da
Monoisotopic183.0657338Da
BASm0003987cob(I)alaminC62H88CoN13O14PChemical structure of cob(I)alamin18534-66-2
Average1329.3478Da
Monoisotopic1328.564331Da
BASm00040072-methoxy-6-all-trans-octaprenyl-1,4-benzoquinolC47H72O3Chemical structure of 2-methoxy-6-all-trans-octaprenyl-1,4-benzoquinolNot available
Average685.0728Da
Monoisotopic684.5481462Da
BASm0004098L-alanyl-L-glutamateC8H13N2O5Chemical structure of L-alanyl-L-glutamateNot available
Average217.1992Da
Monoisotopic217.082446536Da

Displaying 31–40 of 273 metabolites