Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas vasicola |
| Strain | strain R5P |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
873002 bp
Thymine Count
869914 bp
Guanine Count
1504924 bp
Cytosine Count
1512838 bp
Genome Length
4760678 bp
Protein-coding Genes
3839 genes
Non-Coding Genes
233 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Is1404 transposase | DEG04_007440 | Not Available | - | 1577471 - 1577797 | 12392.1 |
| Tail completion protein | DEG04_007445 | Not Available | - | 1577868 - 1578245 | 14317.4 |
| Predicted tail completion | DEG04_007450 | Not Available | - | 1578233 - 1578651 | 14946.0 |
| Gp32 | DEG04_007455 | Not Available | - | 1578648 - 1579135 | 17046.4 |
| Phage lytic enzyme | DEG04_007460 | Not Available | - | 1579135 - 1579776 | 23356.9 |
| Phage-encoded membrane protein | DEG04_007465 | Not Available | - | 1579773 - 1580048 | 9785.31 |
| Phage-encoded membrane protein | DEG04_007470 | Not Available | - | 1580041 - 1580397 | 11956.7 |
| Tail protein | DEG04_007475 | Not Available | - | 1580402 - 1580611 | 7446.07 |
| Phage head completion/stabilization protein | DEG04_007480 | Not Available | - | 1580611 - 1580715 | 4020.74 |
| Dna packaging protein | DEG04_018185 | Not Available | + | 3906443 - 3906988 | 20442.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.